.. _whats_new:

.. title:: List of updates

What's new?
======================================

v2.0.1 (October 19, 2022)
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Trying to put the python version on PyPi

::

    ↪ [DOC 📄] Updated documentations                       |  @saratheriver
    

v2.0.0 (July 26, 2022)
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One year of bug fixing and brand spanking new BigBrain moments

::

    ↪ [FIX 🐛] Bug fixes all throughout                     |  @saratheriver
    ↪ [DOC 📄] Updated documentations                       |  @saratheriver
    ↪ [NEW 💾] New BigBrain moments                         |  @caseypaquola


v1.1.3 (July 28, 2021)
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Typo in ``economo_koskinas_spider`` matlab function.

::

    ↪ [FIX 🐛] Fixed typo in economo_koskinas_spider        |  @saratheriver
    ↪ [DOC 📄] Updated citation                             |  @saratheriver


v1.1.2 (June 30, 2021)
------------------------------------------
Replaced dashes with underscores in summary statistics.

::

    ↪ [FIX 🐛] Removed dashes in sumstats                   |  @saratheriver
    ↪ [DOC 📄] Update documentations                        |  @saratheriver


v1.1.1 (April 12, 2021)
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New import/export features for CIfTI files. Improved documentation.

::

    ↪ [NEW 💾] New import/export module (CIfTI)             |  @NicoleEic, @saratheriver
    ↪ [DOC 📄] Update documentations                        |  @saratheriver


v1.1.0 (March 15, 2021)
------------------------------------------
New import/export features allowing compatibility with other dataset formats and neuroimaging softwares. Improved documentation.

::

    ↪ [NEW 💾] New import/export module                     |  @saratheriver
    ↪ [FIX 🐛] Fix spin permutation index error             |  @saratheriver
    ↪ [DOC 📄] Update documentations                        |  @saratheriver


v1.0.3 (February 25, 2021)
------------------------------------------
OCD subcortical volume measures were not loading when using ``load_summary_stats('ocd')``; this issue is now resolved.

::

    ↪ [ENH 🔧] Fix OCD sctx summary stats loading issue     |  @saratheriver
    ↪ [DOC 📄] Update documentations                        |  @saratheriver


v1.0.2 (February 23, 2021)
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Bug fixes in the ``fetch_ahba`` function. Users who wish to use this function (or have used it in a previous version) 
must update their **ENIGMA Toolbox** to this release; ``fetch_ahba`` from previous releases will now error.

::

    ↪ [ENH 🔧] Fix python version mislabeling                |  @saratheriver
    ↪ [ENH 🔧] Fix bug and replace stable gene lists         |  @saratheriver
    ↪ [DOC 📄] Update documentations                         |  @saratheriver


v1.0.1 (January 11, 2021)
------------------------------------------
Bug fixes and improvement

::

    ↪ [ENH 🔧] Enhance cross-disorder module                 |  @saratheriver
    ↪ [ENH 🔧] Fix bug in surface visualization              |  @saratheriver


v1.0.0 (December 22, 2020)
------------------------------------------
Initial release 😱

::

    ↪ [DOC 📄] Citation for ENIGMA Toolbox preprint          |  @saratheriver
    ↪ [NEW 🗽] Pip package available                         |  @saratheriver


v0.1.2 (December 20, 2020)
------------------------------------------
Bug fixes and improvement - still in pre-release

::

    ↪ [DOC 📄] Revise documentations                         |  @saratheriver
    ↪ [NEW 🗽] Generalizability to several parcellations     |  @saratheriver
    ↪ [NEW 🗽] Additional parcellations for HCP connectivity |  @saratheriver
    ↪ [NEW 🗽] Additional parcellations for AHBA             |  @saratheriver
    ↪ [NEW 🗽] Additional parcellations for histology module |  @saratheriver
    ↪ [NEW 🗽] Cross-disorder module                         |  @boyongpark, @saratheriver
    ↪ [ENH 🔧] Fix bug in fetch_ahba                         |  @saratheriver
    ↪ [ENH 🔧] Reference updates                             |  @saratheriver



v0.1.1 (November 14, 2020)
------------------------------------------
Bug fixes and improvement following beta testing - still in pre-release

::

    ↪ [TES 🧪] Toolbox testing                               |  @boyngpark, @royj23, @caseypaquola, @YezhouWang, @sofievalk
    ↪ [DOC 📄] Revise documentations                         |  @saratheriver
    ↪ [ENH 🔧] Fix minor code bugs here and there            |  @saratheriver
    ↪ [ENH 🔧] Remove unstable genes across donors           |  @saratheriver
    ↪ [NEW 🗽] BigBrain contextualization module             |  @caseypaquola, @saratheriver
    ↪ [NEW 🗽] Cytoarchitectonics contextualization module   |  @caseypaquola, @saratheriver
    ↪ [NEW 🗽] HCP subcortico-subcortical connectivity       |  @saratheriver
    ↪ [ENH 🔧] References for new modules                    |  @saratheriver
    ↪ [ENH 🔧] Update API for new functions                  |  @saratheriver


v0.1.0 (October 16, 2020)
------------------------------------------
Pre-release of the **ENIGMA TOOLBOX**: it's the start of a beautiful thing!

::

    ↪ [DOC 📄] Write and revise various documentations       |  @saratheriver
    ↪ [STY 🎨] Stylistic updates to ReadTheDocs              |  @saratheriver
    ↪ [NEW 🗽] Load example data                             |  @saratheriver
    ↪ [NEW 🗽] Load summary statistics                       |  @saratheriver
    ↪ [NEW 🗽] Load connectivity data                        |  @saratheriver
    ↪ [NEW 🗽] Hub susceptibility model                      |  @saratheriver
    ↪ [NEW 🗽] Spin permutation tests                        |  @saratheriver
    ↪ [NEW 🗽] Epicenter mapping                             |  @saratheriver
    ↪ [NEW 🗽] Fetch gene expression data                    |  @saratheriver
    ↪ [NEW 🗽] Extract disease-related gene expression maps  |  @saratheriver
    ↪ [NEW 🗽] Surface data visualization tools              |  @saratheriver