What’s new?¶
v2.0.0 (July 26, 2022)¶
One year of bug fixing and brand spanking new BigBrain moments
↪ [FIX 🐛] Bug fixes all throughout | @saratheriver
↪ [DOC 📄] Updated documentations | @saratheriver
↪ [NEW 💾] New BigBrain moments | @caseypaquola
v1.1.3 (July 28, 2021)¶
Typo in economo_koskinas_spider
matlab function.
↪ [FIX 🐛] Fixed typo in economo_koskinas_spider | @saratheriver
↪ [DOC 📄] Updated citation | @saratheriver
v1.1.2 (June 30, 2021)¶
Replaced dashes with underscores in summary statistics.
↪ [FIX 🐛] Removed dashes in sumstats | @saratheriver
↪ [DOC 📄] Update documentations | @saratheriver
v1.1.1 (April 12, 2021)¶
New import/export features for CIfTI files. Improved documentation.
↪ [NEW 💾] New import/export module (CIfTI) | @NicoleEic, @saratheriver
↪ [DOC 📄] Update documentations | @saratheriver
v1.1.0 (March 15, 2021)¶
New import/export features allowing compatibility with other dataset formats and neuroimaging softwares. Improved documentation.
↪ [NEW 💾] New import/export module | @saratheriver
↪ [FIX 🐛] Fix spin permutation index error | @saratheriver
↪ [DOC 📄] Update documentations | @saratheriver
v1.0.3 (February 25, 2021)¶
OCD subcortical volume measures were not loading when using load_summary_stats('ocd')
; this issue is now resolved.
↪ [ENH 🔧] Fix OCD sctx summary stats loading issue | @saratheriver
↪ [DOC 📄] Update documentations | @saratheriver
v1.0.2 (February 23, 2021)¶
Bug fixes in the fetch_ahba
function. Users who wish to use this function (or have used it in a previous version)
must update their ENIGMA Toolbox to this release; fetch_ahba
from previous releases will now error.
↪ [ENH 🔧] Fix python version mislabeling | @saratheriver
↪ [ENH 🔧] Fix bug and replace stable gene lists | @saratheriver
↪ [DOC 📄] Update documentations | @saratheriver
v1.0.1 (January 11, 2021)¶
Bug fixes and improvement
↪ [ENH 🔧] Enhance cross-disorder module | @saratheriver
↪ [ENH 🔧] Fix bug in surface visualization | @saratheriver
v1.0.0 (December 22, 2020)¶
Initial release 😱
↪ [DOC 📄] Citation for ENIGMA Toolbox preprint | @saratheriver
↪ [NEW 🗽] Pip package available | @saratheriver
v0.1.2 (December 20, 2020)¶
Bug fixes and improvement - still in pre-release
↪ [DOC 📄] Revise documentations | @saratheriver
↪ [NEW 🗽] Generalizability to several parcellations | @saratheriver
↪ [NEW 🗽] Additional parcellations for HCP connectivity | @saratheriver
↪ [NEW 🗽] Additional parcellations for AHBA | @saratheriver
↪ [NEW 🗽] Additional parcellations for histology module | @saratheriver
↪ [NEW 🗽] Cross-disorder module | @boyongpark, @saratheriver
↪ [ENH 🔧] Fix bug in fetch_ahba | @saratheriver
↪ [ENH 🔧] Reference updates | @saratheriver
v0.1.1 (November 14, 2020)¶
Bug fixes and improvement following beta testing - still in pre-release
↪ [TES 🧪] Toolbox testing | @boyngpark, @royj23, @caseypaquola, @YezhouWang, @sofievalk
↪ [DOC 📄] Revise documentations | @saratheriver
↪ [ENH 🔧] Fix minor code bugs here and there | @saratheriver
↪ [ENH 🔧] Remove unstable genes across donors | @saratheriver
↪ [NEW 🗽] BigBrain contextualization module | @caseypaquola, @saratheriver
↪ [NEW 🗽] Cytoarchitectonics contextualization module | @caseypaquola, @saratheriver
↪ [NEW 🗽] HCP subcortico-subcortical connectivity | @saratheriver
↪ [ENH 🔧] References for new modules | @saratheriver
↪ [ENH 🔧] Update API for new functions | @saratheriver
v0.1.0 (October 16, 2020)¶
Pre-release of the ENIGMA TOOLBOX: it’s the start of a beautiful thing!
↪ [DOC 📄] Write and revise various documentations | @saratheriver
↪ [STY 🎨] Stylistic updates to ReadTheDocs | @saratheriver
↪ [NEW 🗽] Load example data | @saratheriver
↪ [NEW 🗽] Load summary statistics | @saratheriver
↪ [NEW 🗽] Load connectivity data | @saratheriver
↪ [NEW 🗽] Hub susceptibility model | @saratheriver
↪ [NEW 🗽] Spin permutation tests | @saratheriver
↪ [NEW 🗽] Epicenter mapping | @saratheriver
↪ [NEW 🗽] Fetch gene expression data | @saratheriver
↪ [NEW 🗽] Extract disease-related gene expression maps | @saratheriver
↪ [NEW 🗽] Surface data visualization tools | @saratheriver