What’s new?

v1.1.3 (July 28, 2021)

Typo in economo_koskinas_spider matlab function.

↪ [FIX 🐛] Fixed typo in economo_koskinas_spider        |  @saratheriver
↪ [DOC 📄] Updated citation                             |  @saratheriver

v1.1.2 (June 30, 2021)

Replaced dashes with underscores in summary statistics.

↪ [FIX 🐛] Removed dashes in sumstats                   |  @saratheriver
↪ [DOC 📄] Update documentations                        |  @saratheriver

v1.1.1 (April 12, 2021)

New import/export features for CIfTI files. Improved documentation.

↪ [NEW 💾] New import/export module (CIfTI)             |  @NicoleEic, @saratheriver
↪ [DOC 📄] Update documentations                        |  @saratheriver

v1.1.0 (March 15, 2021)

New import/export features allowing compatibility with other dataset formats and neuroimaging softwares. Improved documentation.

↪ [NEW 💾] New import/export module                     |  @saratheriver
↪ [FIX 🐛] Fix spin permutation index error             |  @saratheriver
↪ [DOC 📄] Update documentations                        |  @saratheriver

v1.0.3 (February 25, 2021)

OCD subcortical volume measures were not loading when using load_summary_stats('ocd'); this issue is now resolved.

↪ [ENH 🔧] Fix OCD sctx summary stats loading issue     |  @saratheriver
↪ [DOC 📄] Update documentations                        |  @saratheriver

v1.0.2 (February 23, 2021)

Bug fixes in the fetch_ahba function. Users who wish to use this function (or have used it in a previous version) must update their ENIGMA Toolbox to this release; fetch_ahba from previous releases will now error.

↪ [ENH 🔧] Fix python version mislabeling                |  @saratheriver
↪ [ENH 🔧] Fix bug and replace stable gene lists         |  @saratheriver
↪ [DOC 📄] Update documentations                         |  @saratheriver

v1.0.1 (January 11, 2021)

Bug fixes and improvement

↪ [ENH 🔧] Enhance cross-disorder module                 |  @saratheriver
↪ [ENH 🔧] Fix bug in surface visualization              |  @saratheriver

v1.0.0 (December 22, 2020)

Initial release 😱

↪ [DOC 📄] Citation for ENIGMA Toolbox preprint          |  @saratheriver
↪ [NEW 🗽] Pip package available                         |  @saratheriver

v0.1.2 (December 20, 2020)

Bug fixes and improvement - still in pre-release

↪ [DOC 📄] Revise documentations                         |  @saratheriver
↪ [NEW 🗽] Generalizability to several parcellations     |  @saratheriver
↪ [NEW 🗽] Additional parcellations for HCP connectivity |  @saratheriver
↪ [NEW 🗽] Additional parcellations for AHBA             |  @saratheriver
↪ [NEW 🗽] Additional parcellations for histology module |  @saratheriver
↪ [NEW 🗽] Cross-disorder module                         |  @boyongpark, @saratheriver
↪ [ENH 🔧] Fix bug in fetch_ahba                         |  @saratheriver
↪ [ENH 🔧] Reference updates                             |  @saratheriver

v0.1.1 (November 14, 2020)

Bug fixes and improvement following beta testing - still in pre-release

↪ [TES 🧪] Toolbox testing                               |  @boyngpark, @royj23, @caseypaquola, @YezhouWang, @sofievalk
↪ [DOC 📄] Revise documentations                         |  @saratheriver
↪ [ENH 🔧] Fix minor code bugs here and there            |  @saratheriver
↪ [ENH 🔧] Remove unstable genes across donors           |  @saratheriver
↪ [NEW 🗽] BigBrain contextualization module             |  @caseypaquola, @saratheriver
↪ [NEW 🗽] Cytoarchitectonics contextualization module   |  @caseypaquola, @saratheriver
↪ [NEW 🗽] HCP subcortico-subcortical connectivity       |  @saratheriver
↪ [ENH 🔧] References for new modules                    |  @saratheriver
↪ [ENH 🔧] Update API for new functions                  |  @saratheriver

v0.1.0 (October 16, 2020)

Pre-release of the ENIGMA TOOLBOX: it’s the start of a beautiful thing!

↪ [DOC 📄] Write and revise various documentations       |  @saratheriver
↪ [STY 🎨] Stylistic updates to ReadTheDocs              |  @saratheriver
↪ [NEW 🗽] Load example data                             |  @saratheriver
↪ [NEW 🗽] Load summary statistics                       |  @saratheriver
↪ [NEW 🗽] Load connectivity data                        |  @saratheriver
↪ [NEW 🗽] Hub susceptibility model                      |  @saratheriver
↪ [NEW 🗽] Spin permutation tests                        |  @saratheriver
↪ [NEW 🗽] Epicenter mapping                             |  @saratheriver
↪ [NEW 🗽] Fetch gene expression data                    |  @saratheriver
↪ [NEW 🗽] Extract disease-related gene expression maps  |  @saratheriver
↪ [NEW 🗽] Surface data visualization tools              |  @saratheriver